Peer Reviewed Publications and Conference Proceedings
Cannon, J., Kopell, N., Gardner, T., & Markowitz, J. (2015). Neural Sequence Generation Using Spatiotemporal Patterns of Inhibition. PLoS Comput Biol, 11(11), e1004581.

Meignen, S., Gardner, T., & Oberlin, T. (2015, August). Time-frequency ridge analysis based on the reassignment vector. In Signal Processing Conference (EUSIPCO), 2015 23rd European (pp. 1486-1490). IEEE.

Markowitz JE, Liberti WA, Guitchounts G, Velho T, Lois C, Gardner TJ (2015). Mesoscopic Patterns of Neural Activity Support Songbird Cortical Sequences. PLOS Biology DOI: 10.1371/journal.pbio.1002158

Liu, H., Totachawattana, A., Mërtiri, A., Hong, M. K., Gardner, T., Erramilli, S., & Sander, M. Y. (2014, September).
Mid-IR photothermal imaging with a compact ultrafast fiber probe laser. In SPIE Optical Engineering+ Applications (pp. 919808-919808). International Society for Optics and Photonics.

Mertiri, A., Totachawattana, A., Liu, H., Hong, M. K., Gardner, T., Sander, M. Y., & Erramilli, S. (2014, June).
Label Free Mid-IR Photothermal Imaging of Bird Brain With Quantum Cascade Laser. In CLEO: Applications and Technology (pp. AF1B-4). Optical Society of America.

Aoi MC, Lepage KQ, Eden UT, Lim Y, Gardner TJ. (2014) An approach to time-frequency analysis with the ridges of the continuous chirplet transform. DOI 10.1109/TSP.2014.2365756, IEEE Transactions on Signal Processing

Lim Y, BG Shinn-Cunningham, and TJ Gardner,
Stable Time-Frequency Contours for Sparse Signal Representation, EUSIPCO-2013

Guitchounts, G, Markowitz JE, Liberti WE, Gardner TJ.
A carbon-fiber electrode array for long-term neural recording (2013) J. Neural. Eng. 10;046016

Markowitz, JE, Ivie E, Kligler, K, Gardner TJ, Long-range order in canary song. PLoS Comp. Bio. 2013:9(5) : e1003052

Lim Y, BG Shinn-Cunningham, and TJ Gardner Sparse Contour Representations of Sound IEEE Signal Processing Letters, 2012;19(10) 684-687

Poole B, Markowitz JE, Gardner TJ (2012) The Song Must Go On: Resilience of the Songbird Vocal Motor Pathway. PLoS ONE 7(6): e38173.doi:10.1371/journal.pone.0038173

Scott, B. B., Gardner, T., Ji, N., Fee, M. S., & Lois, C. (2012). Wandering neuronal migration in the postnatal vertebrate forebrain. Journal of Neuroscience, 32(4), 1436–1446.

Lim Y, BG Shinn-Cunningham, and TJ Gardner (2011). Contour representations of sound Proceedings of the 2011 IEEE Workshop on Applications of Signal Processing to Audio and Acoustics, New Paltz, NY, 16-19 October.

Ölveczky BP, Gardner TJ.
A bird's eye view of neural circuit formation. Current Opinion in Neurobiology. 2011;21(1):124–131.

Gardner TJ, Magnasco MO.
Sparse time-frequency representations. Proceedings of the National Academy of Sciences of the United States of America. 2006;103(16):6094–6099.

Gardner TJ, Naef F, Nottebohm F.
Freedom and rules: the acquisition and reprogramming of a bird's learned song. Science. 2005; 308(5724):1046.

Gardner TJ, Magnasco MO.
Instantaneous frequency decomposition: an application to spectrally sparse sounds with fast frequency modulations. Journal of the Acoustic Society of America. 2005;117(5):2896–2903.

Liu W-C, Gardner TJ, Nottebohm F.
Juvenile zebra finches can use multiple strategies to learn the same song. Proceedings of the National Academy of Sciences of the United States of America. 2004;101(52):18177–18182.

Ribeiro S, Mello CV, Velho T, Gardner TJ, Jarvis ED, Pavlides C.
Induction of hippocampal long-term potentiation during waking leads to increased extrahippocampal zif-268 expression during ensuing rapid-eye-movement sleep. Journal of Neuroscience. 2002;22(24):10914–10923.

Mindlin GB, Gardner TJ, Goller F, Suthers R.
Experimental support for a model of birdsong production. Phys Rev E Stat Nonlin Soft Matter Phys. 2003;68(4 Pt 1):041908.

Laje R, Gardner T, Mindlin G.
Neuromuscular control of vocalizations in birdsong: A model. Phys. Rev. E. 2002;65:051921.

Laje R, Gardner T, Mindlin GB.
Continuous model for vocal fold oscillations to study the effect of feedback Phys Rev E Stat Nonlin Soft Matter Phys. 2001;64(5 Pt 2):056201.

Gardner T, Cecchi G, Magnasco M, Laje R, Mindlin GB.
Simple motor gestures for birdsongs. Physical Review Letters. 2001;87(20):208101.