Skirpan A, Culler AH, Gallavotti A, Jackson D, Cohen JD and McSteen P (2009)

BARREN INFLORESCENCE2 interaction with ZmPIN1a suggests a role in auxin transport during maize inflorescence development. Plant and Cell Physiol 50:652-657

Sun J, Xu Y, Ye S, Chen Q, Zhou W, Chen R, Liu F, Li X, Tietz O,Wu X,Jiang

H,Cohen JD, Palme K and Li C (2009) The Arabidopsis ASA1 gene is important for jasmonate-mediated regulation of auxin biosynthesis and transport during lateral root formation. Plant Cell 21:1495-1511

Wang L, Tsuda K, Sato M, Cohen JD, Katagiri F and Glazebrook J  (2009) Arabidopsis CaM Binding Protein CBP60g Contributes to MAMP-induced SA accumulation and is involved in disease resistance against Pseudomonas syringae. PLoS Pathog 5(2): e1000301. doi:10.1371/journal.ppat.1000301

2010

Barkawi LS and Cohen JD (2010) A method for concurrent diazomethane synthesis and substrate methylation in a 96-sample format.  Nature Protocols 5:1619–1626

Barkawi LS, Tam YY, Tillman JA, Normanly J and Cohen JD (2010) A high throughput method for the quantitative analysis of auxins. Nature Protocols 5:1609–1618

Ge L, Peer W, Robert S, Swarup R, Ye S, Prigge M, Cohen JD, Friml J, Murphy A, Tang D and Estelle M (2010) Arabidopsis ROOT UVB SENSITIVE2/WEAK AUXIN RESPONSE1 is required for polar auxin transport. Plant Cell 22:1749-1761.

Liu F, Jiang H, Ye S, Chen W-P, Liang W, Xu Y, Sun B, Sun J, Wang Q, Cohen

JD and Li C (2010) The Arabidopsis P450 protein CYP82C2 modulates jasmonate induced root growth inhibition, defense gene expression, and indole glucosinolate biosynthesis. Cell Research 2010:1-14

Ludwig-Müller J, Denk K, Cohen JD and Quint M (2010) An inhibitor of tryptophan-dependent biosynthesis of indole-3-acetic acid alters seedling development in Arabidopsis. J Plant Growth Regul 29:242-248

Negi S, Sukumar P, Liu X, Cohen JD, Muday GK (2010)Genetic dissection of the role of ethylene in regulating auxin dependent lateral and adventitious root formation in tomato. Plant J 61:3-15

Qi Y, Tsuda K, Joe A, Sato M, Nguyen LV, Glazebrook J, Alfano JR, Cohen JD and Katagiri F (2010) A putative RNA-binding protein positively regulates salicylic acid-mediated immunity in Arabidopsis. Molecular Plant-Microbe Interactions 23:1573-1583

Strader LC, Culler AH, Cohen JD and Bartel B (2010) Conversion of endogenous indole-3-butyric acid to indole-3-acetic acid drives cell expansion in Arabidopsis seedlings. Plant Physiol 153:1577-1586

2011

Boswell PG, Schellenberg JR, Carr PW, Cohen JD and Hegeman AD (2011) A Study on Retention “Projection” as a Supplementary Means for Compound Identification by Liquid Chromatography-Mass Spectrometry Capable of Predicting Retention With Different Gradients, Flow Rates, and Instruments. J Chromatogr A (in press)

Boswell PG, Schellenberg JR, Carr PW, Cohen JD and Hegeman AD (2011)  Easy and Accurate High-Performance Liquid Chromatography Retention Prediction With Different Gradients, Flow Rates, and Instruments by Back-Calculation of Gradient and Flow Rate Profiles. J Chromatogr A (in press)

Cheng N, Liu JZ, Liu X, Wu Q, Thompson SM, Lin J, Chang J, Whitham SA, Park S, Cohen JD and Hirschi KD (2011) Arabidopsis monothiol glutaredoxin, AtGRXS17, is essential for temperature-dependent postembryonic growth and development via modulating auxin response.  J Biol Chem 286:20398-20406

Nonhebel HM, Yuan Y, Al-Amier H, Pieck M, Akor E, Ahamed A, Cohen JD, Celenza JL and Normanly J (2011) Redirection of Trp metabolism in tobacco by ectopic expression of an Arabidopsis indolic glucosinolate biosynthetic gene. Phytochemistry 72:37-48

Phillips KA, Skirpan AL, Liu X, Christensen A, Slewinski TL, Hudson C, Barazesh S, Cohen JD, Malcomber S and McSteen P (2011) vanishing tassel2 encodes a grass-specific tryptophan aminotransferase required for vegetative and reproductive development in maize. Plant Cell 23: 550–566

Strader LC, Wheeler DL, Christensen SE, Berens JC, Cohen JD, Rampey RA and Bartel B (2011) Multiple facets of Arabidopsis seedling development require indole-3-butyric acid-derived auxin. Plant Cell 23: 984-99.

Books or other non-periodical, one-time publications

Normanly J (2010) Approaching cellular and molecular resolution of auxin biosynthesis and metabolism. In: Cold Spring Harbor Lab Perspectives: Auxin Signaling, eds. M. Estelle, D. Weijers, K. Ljung, O. Leyser 2:a001594

Culler AH, Quint M, Slovin JP and Cohen JD (2010) Plant Hormones, Auxins. In

Comprehensive Natural Products II Chemistry and Biology; Mander, L., Lui, H.-

W., Eds.; Elsevier: Oxford, 2010; Vol 4, pp.13–24

In preparation: invited review of auxin biosynthesis for The Arabidopsis Book, Celenza JL and Normanly J.